SELECTED PUBLICATIONS

 
Research Reports
Publication image
Proceedings of FishAdapt: A Global Conference on Climate Change Adaptation for Fisheries and Aquaculture

Johnson J, De Young C, Bahri T, Soto D, Virapat C (Editors)

Food & Agricultural Organisation of the United Nations, Fisheries and Aquaculture Proceedings No. 61. Rome, Italy.

Publication image
Climate change impacts, vulnerabilities and adaptations: Western and Central Pacific Ocean marine fisheries

Bell JD, Allain V, Sen Gupta A, Johnson JE, Hampton J, Hobday AJ, Lehodey P, Lenton A, Moore BR, Pratchett MS, Senina I, Smith N, Williams P (2018)

Impacts of climate change on fisheries and aquaculture: Synthesis of current knowledge, adaptation and mitigation options. Barange M, Bahri T, Beveridge MCM, Cochrane KL, Funge-Smith S, Poulain F. (Editors) FAO Fisheries and Aquaculture Technical Paper No. 627. Rome, FAO, 628 pp.

Publication image
Coral Reefs Vulnerability to Climate Change in West Hawai‘i. NOAA, Hawaii

Maynard JA, Gove J, Tracey D, Johnson JE, Lecky J, Conklin E, van Hooidonk R, Donovan M, Hospital J, Kleiber D, Brainard R, Williams I, Swanson D, Oliver T, Walsh W, Wiggins C, Kramer L. (2018)

National Oceanographic & Atmospheric Administration (NOAA), Hawaii, U.S.A.

Publication image
Pacific Marine Climate Change Report Card

Penehuro Lefale, Howard Diamond, Cheryl Anderson, Andrew Lenton, Richard Matear, Mathieu Mongin, Jerome Aucan, Philip Sutton, Leo Dutra, Michael Haywood, Marta Ferreir, Shubha Shalini Singh, Susanna Piovano, Johanna Johnson, et al. (2018)

Commonwealth Marine Economies Programme (CMES) Bryony Townhill, Paul Buckley, Jeremy Hills, Tommy Moore, Sylvie Goyet, Awnesh Singh, Gilianne Brodie, Patrick Pringle, Sunny Seuseu, Tiffany Straza (Editors). CMES, Centre for Environment, Fisheries and Aquaculture Science (CEFAS), United Kingdom.

Publication image
Wastewater Pollution and Coral Reefs: Science-to-Policy Brief

Johnson JE, Brodie J, Waterhouse J. (2017)

United Nations Environment Programme, Nairobi, Kenya

Publication image
Vulnerability Assessment & Local Early Action Planning (VA-LEAP): Community-based Assessments on Rendova Island, Solomon Islands

Johnson JE and Basel B (2017)

Report to the Pacific-American Climate Fund (PACAM), USAID Program, March 2017.

Publication image
RESCCUE North Efate Marine Ecosystem Assessment

Johanna Johnson, Jane Waterhouse, Michelle Devlin and Eryn Hooper (2016)

RESCCUE Vanuatu Report, Secretariat of the Pacific Community, Noumea, New Caledonia

Publication image
Pacific Islands Ocean Acidification Vulnerability Assessment

Johnson JE, Bell JD and Sen Gupta A (2016)

Secretariat of the Pacific Regional Environment Programme

Publication image
A Final Synthesis: Tropical Research in Australia's Torres Strait Region

Johnson JE, Marsh H, Hamann M, Duke N, Burrows D, Bainbridge S, Sweatman H, Brodie J, Bohensky E, Butler J and Laurance S (2015)

Report prepared for the National Environment Research Program

Publication image
Wet Tropics Water Quality Improvement Plan 2015-2020

Waterhouse J (2015)

Report prepared for Terrain NRM

Publication image
Implications of climate change on fisheries resources of northern Australia. Part 1: Vulnerability assessment and adaptations

Welch DJ, Saunders T, Robins J, Harry A, Johnson JE, Maynard J, Saunders R, Pecl G, Sawynok B and Tobin A (2014)

Report prepared for Fisheries Research Development Corporation, Project No. 2010/565

Publication image
Assessing the vulnerability of Torres Strait fisheries and supporting habitats to climate change

Welch DJ and Johnson JE (2013)

Report prepared for the Australian Fisheries Management Authority

Publication image
Scientific Consensus Statement: Land use impacts on Great Barrier Reef water quality and ecosystems

Brodie JE, Waterhouse J, Schaffelke B, Kroon F, Thorburn P, Rolfe J, Johnson J, Fabricius K, Lewis S, Devlin M, Warne M and McKenzie L (2013)

Reports prepared for the Queensland Government Reef Water Quality Protection Plan

Publication image
Historic and projected future exposure of habitats in the Great Barrier Reef Marine Park to disturbances

Maynard JA, Johnson JE, Puotinen M, van Hooidonk R, Devlin M, Lawrey E and Carrigan A (2013)

Report prepared for the Great Barrier Reef Marine Park Authority

Publication image
Priority adaptations to climate change for Pacific fisheries and aquaculture: reducing risks and capitalizing on opportunities

Johnson JE, Bell JD & De Young C (2013)

FAO Fisheries & Aquaculture Proceedings 28

Publication image
Australia's Marine Biodiversity and Resources in a Changing Climate: A Review of Impacts and Adaptation 2009-2012

Holbrook N & Johnson J (2012)

National Climate Change Adaptation Research Facility
ISBN 978-1-921609-55-8

Publication image
Review of phytoplankton in the Great Barrier Reef and potential links to Crown of Thorns

Project Report prepared for the National Environment Research Program

Devlin MJ, Debose J and Brodie J (2012)

Publication image
Water quality and climate change: managing for resilience

Johnson J & Martin K (Compilers) (2011)

Synthesis Report prepared for the Australian Government's Marine & Tropical Sciences Research Facility

Publication image
Reef Rescue Marine Monitoring Program: 2009/2010 Synthesis Report

Johnson JE, Brando VE, Devlin MJ, McKenzie L, Morris S, Schaffelke B, Thompson A, Waterhouse J & Waycott M (2011)

Report prepared for the Great Barrier Reef Marine Park Authority.
Reef & Rainforest Research Centre Consortium of Monitoring Providers

Publication image
Reef Rescue Marine Monitoring Program: 2008/2009 Synthesis Report

Johnson JE, Waterhouse J, Maynard JA & Morris S (Writing Team) (2010)

Report prepared for the Great Barrier Reef Marine Park Authority.
Reef & Rainforest Research Centre Consortium of Monitoring Providers

Publication image
Improved understanding of biophysical and socio-economic connections between catchment and reef ecosystems: Wet and Dry Tropics case studies

Devlin, M and Waterhouse, J (2010)

Report prepared for the Marine and Tropical Science Research Facility.
Reef and Rainforest Research Centre

Publication image
Advancing our understanding of the source, transport and impacts of pesticides on the Great Barrier Reef and in associated ecological systems: A review of MTSRF research outputs, 2006-2010

Devlin, M and Lewis, S (2011)

Report prepared for the Marine and Tropical Science Research Facility.
Reef and Rainforest Research Centre

Publication image
Current loads of priority pollutants discharged from the Great Barrier Reef catchments to the Great Barrier Reef

Brodie J, Waterhouse J, Lewis S, Bainbridge Z &Johnson J (2009)

ACTFR Report 09/02 to the Department of the Environment, Water, Heritage & the Arts.
Australian Centre for Tropical Freshwater Research, James Cook University

Publication image
Marine habitat assessment and impact of sediment runoff at Clarkes Cove, Whitsunday region

Johnson, JE (2008)

Report prepared for the Queensland Environmental Protection Agency

 
Journal Articles
Publication image
Community-based adaptation to climate change in villages of Western Province, Solomon Islands

Britt Basel, Gillian Goby, Johanna Johnson

Marine Pollution Bulletin
Volume 156

Publication image
Climate change adaptation: Vulnerability and challenges facing small-scale fisheries in small islands

Johnson JE, Monnereau I, Welch DJ, McConney P, Szuster B, Gasalla MA (2019)

FishAdapt Conference Proceedings, Food and Agriculture Organization of the United Nations, FAO Fisheries and Aquaculture Proceedings Rome, FAO.

Publication image
Impacts of Climate Change on Corals Relevant to the Pacific Islands

Dutra, L.X.C., Haywood, M.D.E., Singh, S.S., Ferreira, M., Johnson, J.E., Joeli, V., Kininmonth, S., Morris, C.W. (2018)

CMES Pacific Marine Climate Change Report Card: Science Review 2018, 132-158.

Publication image
Adaptations to maintain the contributions of small-scale fisheries to food security in the Pacific Islands

Bell JD, Cisneros-Montemayor A, Hanich Q, Johnson JE, Lehodey P, Moore B, Pratchett M, Reygondeau G, Senina I, Virdin J, Wabnitz C (2018)

Marine Policy, 88, 303-314. doi.org/10.1016/j.marpol.2017.05.019

Publication image
Assessing and reducing vulnerability to climate change: Moving from theory to practical decision-support

Johnson JE, Welch DJ, Maynard JA, Bell JD, Pecl G, Robins J, Saunders T

Marine Policy, 74, 220-229

Publication image
Climate change implications for Torres Strait fisheries: assessing vulnerability to inform adaptation

Johnson JE and Welch DJ (2016)</p>

Climatic Change, Volume 135, Issue 3: 611-624.

Publication image
Risk spreading in marine protected area zoning to account for variation in exposure to disturbance

Maynard JA, Beeden R, Puotinen M, Johnson JE, Marshall PA, van Hooidonk R, Heron SF, Devlin M, Lawrey E, Dryden J, Ban N, Anthony K, Wachenfeld D and Planes S (2015)

Conservation Letters, doi: 10.1111/conl.12198

Publication image
Using MODIS data for mapping of water types within flood plumes in the Great Barrier Reef, Australia: towards the production of river plume risk maps for reef and seagrass ecosystems

Petus C, Teixeira da Silva E, Álvarez-Romero JG, Devlin MJ, Wenger A and Brodie J (2014)

Journal of Environmental Management Volume 137: 163-177

Publication image
Using MODIS data for understanding changes in seagrass meadow health: a case study in the Great Barrier Reef (Australia)

Petus C, Devlin M and Collier C (2014)

Marine Environmental Research
Volume 98: 68-85

Publication image
Adaptation of Australia’s marine ecosystems to climate change: Using science to inform conservation management

Johnson JE and Holbrook NJ (2014)

International Journal of Ecology
Volume 2014, Article ID 140354, 12 pp.

Publication image
No-anchoring areas reduce coral damage in an effort to build resilience in Keppel Bay, southern Great Barrier Reef

Beeden R, Maynard J, Johnson J, Dryden J, Kininmonth S and Marshall P (2014)

Australasian Journal of Environmental Management
Volume 21(3): 311-319

Publication image
Climate change impacts and adaptation of commercial marine fisheries in Australia: a review of the science

Holbrook NJ and Johnson JE (2014)

Climatic Change
Volume 124: 703-715

Publication image
Establishing boundary classes for the classification of UK marine waters using phytoplankton communities

Wilson JG and Devlin MJ (2013)

Estuarine, Coastal and Shelf Science
Volume 135: 1-4

Publication image
Combining in-situ water quality and remotely sensed data across spatial and temporal scales to measure variability in wet season chlorophyll-a: Great Barrier Reef lagoon (Queensland, Australia)

Devlin MJ, Teixeira da Silva E, Petus C, Wenger A, Zeh D, Tracey D, Alvarez-Romero JG and Brodie J (2013)

Ecological Processes
doi:10.1186/2192-1709-2-31

Publication image
Mixed responses of tropical Pacific fisheries and aquaculture to climate change

Bell JD, Ganachaud AS, Gehrke PC, Griffiths SP, Hobday AJ, Hoegh-Guldberg O, Johnson JE, Le Borgne R, Lehodey P, Lough JM, Matear RJ, Pickering TD, Pratchett MS, Sen Gupta A and Waycott M (2013)

Nature Climate Change
Volume 3: 591-599

Publication image
Effects of climate change on tropical Pacific fisheries and aquaculture

Bell JD, Reid C, Batty MJ, Lehodey P, Rodwell L, Hobday AJ, Johnson JE and Demmke A (2012)

Climatic Change
Volume 119(1): 199-212

Publication image
Quantifying the sources of pollutants to the Great Barrier Reef

Waterhouse J, Brodie J, Lewis S and Mitchell A (2012)

Marine Pollution Bulletin
Volume 65: 394-406

Request a copy
Publication image
Assessment of the eutrophication status of the Great Barrier Reef lagoon (Australia)

Brodie JE, Devlin M, Haynes D & Waterhouse J (2011)

Biogeochemistry
Volume 106(2): 281-302

Publication image
Preface: "Eutrophication" issue of Biogeochemistry

Bricker S and Devlin M (2011)

Biogeochemistry
Volume 106: 135-136

Publication image
Comparison of five methods for assessing impacts of nutrient enrichment using estuarine case studies

Devlin M, Bricker S & Painting S (2011)

Biogeochemistry
Volume 106(2): 177-205

Publication image
A simulation tool for designing nutrient monitoring programmes for eutrophication assessments

Hefferman J, Barry J, Devlin M & Fryer R (2010)

Environmetrics
Volume 21(1): 3-20

Publication image
Building resilience into practical conservation: identifying local management responses to global climate change in the southern Great Barrier Reef

Maynard JA, Marshall PA, Johnson JE & Harman S (2010)

Coral Reefs
Volume 29: 381-391

Publication image
Marine Fisheries Management in a Changing Climate: A Review of Vulnerability and Future Options

Johnson JE & Welch DJ (2010)

Reviews in Fisheries Science
Volume 18(1): 106-124

Publication image
Estimating the diffuse attenuation coefficient from optically active constituents in UK marine waters

Devlin MJ, Barry J, Mills DK, Gowen RJ, Foden J, Sivyer D, Greenwood N, Pearce D & Tett P (2009)

Estuarine, Coastal and Shelf Science
Volume 82(1): 73-83

Publication image
Extending the phytoplankton tool kit for the UK Water Framework Directive: indicators of phytoplankton community structure

Devlin M, Barry J, Painting S and Best M (2009)

Hydrobiologia
Volume 633(1): 151-168

Publication image
A strategic framework for responding to coral bleaching events in a changing climate

Maynard JA, Johnson JE, Marshall PA, Eakin CM, Goby G, Schuttenberg H & Spillman CM (2009)

Environmental Management
Volume 44(1): 1-11

Publication image
Climate change, coral reef ecosystems, and management options for Marine Protected Areas

Keller BD, Gleason DF, McLeod E, Woodley CM, Airame S, Causey BD, Friedlander AM, Grover-Dunsmore R, Johnson JE, Miller SL &amp; Steneck RS (2009)

Environmental Management
Volume 44(6): 1069-1088

Publication image
Relationships between suspended particulate material, light attenuation and Secchi depth in UK marine waters

Devlin M, Barry J, Mills DK, Gowen RJ, Foden J, Sivyer D & Tett P (2008)

Estuarine, Coastal and Shelf Science
Volume 79: 429-439

Publication image
Implementation of the Water Framework Directive in European marine waters

Devlin M, Best M and Haynes D (2007)

Marine Pollution Bulletin (Special Issue)
Volume 55: 1-2

Publication image
Establishing boundary classes for the classification of UK marine waters using phytoplankton communities

Devlin M, Best M, Coates D, Bresnan E, O'Boyle S, Park R, Silke J, Cusack C and Skeats J (2007)

Marine Pollution Bulletin (Special Issue)
Volume 55: 91-103

Publication image
Assessing the suitability of OSPAR EcoQOs for eutrophication vs ICES criteria for England and Wales

Painting SJ, Devlin MJ, Rogers SI, Mills DK, Parker ER and Rees HL (2005)

Marine Pollution Bulletin
Volume 50(12): 1569-1584

 
Books and Book Chapters
Publication image
Status and Trends of Coral Reefs of the Pacific: Republic of Vanuatu (2018)

Johnson JE, Hooper E, Waterhouse J, Dwyer S, Kaltavara J.

Status and Trends of Coral Reefs of the Pacific.Moritz, C., Vii, J., Tamelander, J., Thomassin, A., Anderson, P., Lee Long, W., Planes, S. (Editors). Global Coral Reef Monitoring Network, French Polynesia.

Publication image
Chapter 11 – The Pacific Islands: Fisheries and Aquaculture and Climate Change (2017)

Johnson JE, Bell JD, Allain V, Hanich Q, Lehodey P, Moore B, Nicol S, Pickering T

Climate Change Impacts on Fisheries & Aquaculture: A Global Analysis. Pillips B and Ramirez M (Editors). Wiley Pubs, New York, USA

Publication image
Monitoring and mapping of flood plumes in the Great Barrier Reef based on in-situ and remote sensing observations

Devlin M, Schroeder T, McKinna L, Brodie J, Brando V and Dekker A (2012)

In: Environmental Remote Sensing and Systems Analysis. CRC Press, Boca Raton

Publication image
Vulnerability of Tropical Pacific Fisheries and Aquaculture to Climate Change

Bell JD, Johnson JE and Hobday AJ (2011)

Secretariat of the Pacific Community, New Caledonia
ISBN 978-982-00-0471-9

Publication image
Vulnerability of Tropical Pacific Fisheries and Aquaculture to Climate Change: Summary for Countries and Territories

Bell JD, Johnson JE, Hobday AJ, Ganachaud A, Gehrke P, Hoegh-Guldberg O, Le Borgne R, Lehodey P, Lough J, Pickering T, Pratchett M and Waycott M (2011)

Secretariat of the Pacific Community, New Caledonia
ISBN 978-982-00-0471-9

Publication image
Chapter 1: The Pacific Community, fisheries, aquaculture and climate change: an introduction

Bell JD, Adams TJH, Johnson JE, Hobday AJ and Sen Gupta A (2011)

In: Vulnerability of tropical Pacific fisheries and aquaculture to climate change. Bell J, Johnson JE and Hobday AJ (Eds.). Secretariat of the Pacific Community, New Caledonia

Publication image
Chapter 6: Vulnerability of mangrove, seagrass and intertidal sand and mud flat habitats in the tropical Pacific to climate change

Waycott M, McKenzie L, Mellors J, Ellison J, Sheaves M, Collier C, Schwarz AM, Webb A, Johnson JE and Payri C (2011)

In: Vulnerability of tropical Pacific fisheries and aquaculture to climate change. Bell J, Johnson JE and Hobday AJ (Eds.). Secretariat of the Pacific Community, New Caledonia

Publication image
Chapter 12: Economic and social implications of climate change for contributions by fisheries and aquaculture to the Pacific Community

Bell JD, Reid C, Batty MJ, Allison EH, Lehodey P, Rodwell L, Pickering T, Gillett R, Johnson JE, Hobday AJ and Demmke A (2011)

In: Vulnerability of tropical Pacific fisheries and aquaculture to climate change. Bell J, Johnson JE and Hobday AJ (Eds.). Secretariat of the Pacific Community, New Caledonia

Publication image
Great Barrier Reef case study

Waterhouse J, Grundy M, Gordon I, Brodie J, Eberhard R & Yorkston H (2009)

Chapter 15 in Handbook of Catchment Management (eds. Ferrier R &Jenkins A)
ISBN 978-1-4051-7122-9

Publication image
Chapter 5: Marine Protected Areas

Keller B, Causey B, Airame S, Friedlander A, Johnson JE and West J (2008)

In: Review of adaptation options for climate-sensitive ecosystems and resources. USA Climate Change Science Program

Publication image
Climate change and the Great Barrier Reef: a vulnerability assessment

Johnson JE and Marshall PA (Eds.) (2007)

Published by the Great Barrier Reef Marine Park Authority

Publication image
Chapter 1: Introduction to the Great Barrier Reef and climate change

Wachenfeld D, Johnson JE, Skeat A, Kenchington R, Marshall PA and Innes J (2007)

In: Climate Change and the Great Barrier Reef: a vulnerability assessment. Johnson JE and Marshall PA (Eds.). Published by the Great Barrier Reef Marine Park Authority

Publication image
Chapter 17: Vulnerability of coral reefs of the Great Barrier Reef to climate change

Fabricius KE, Hoegh-Guldberg O, Johnson JE, McCook LJ and Lough J (2007)

In: Climate Change and the Great Barrier Reef: a vulnerability assessment. Johnson JE and Marshall PA (Eds.). Published by the Great Barrier Reef Marine Park Authority

Publication image
Chapter 24: The Great Barrier Reef and climate change: vulnerability and management implications

Marshall PA and Johnson JE (2007)

In: Climate Change and the Great Barrier Reef: a vulnerability assessment.
Johnson JE and Marshall PA (Eds.). Published by the Great Barrier Reef Marine Park Authority

Proceedings
Publication image
Research and information priorities for Great Barrier Reef water quality management: supporting Reef Plan, Reef Rescue and the Reef Water Quality Partnership Science Strategy 2008-2013

Waterhouse J, Lunnon R & Eberhard R (eds.) (2008)

Workshop Outcomes, 10-11 March 2008, Riverglen Conference Centre, Brisbane